Changelog

ClinReport 0.9.1.6 2019-02-19

Enhancement

  • Deprecated arguments (x1.name, x2.name, x3.name) in report.lsmeans function it’s now replaced by x1, x2 and x3 so it’s consistent with report.quanti and report.quali

  • It’s now possible to export anova tables in report.doc function (see examples in report.doc)

  • It’s now possible to export a ggplot corresponding to a desc object. It can be a quali, quanti or lsmeans desc object so the corresponding graphics are barplot or lineplot with or without confidence intervals (see examples in report.doc function).

Issues

  • The code has been cleaned (no more eval(parse(text=…)) )
  • Suppressed some recursive calls

ClinReport 0.9.1.7 Unreleased

Enhancement

  • Add the font.size option

ClinReport 0.9.1.8 2019-02-27

Issues

  • Corrected the code of report.lsmeans which reported systematically in response values the lsmeans of GLM models

Enhancement

  • Add the add.mad option in report.quanti so the mad is not systematically reported

ClinReport 0.9.1.9 Unreleased

Issues

  • Correction of nbcol argument when x2=NULL and x1!=NULL in report.quali function
  • Correction of a footenote issue for ls-means reporting of GLM model

Enhancement

  • function report.quanti: stop using group_by_: replaced by group_by
  • function report.quanti: remove the funs_ in summarise_at
  • Add a vignette in the package
  • Add a footer_row and hline to all report.doc outputs

ClinReport 0.9.1.10 2019-03-05

Issues

  • correction of report.lsmeans: always updated the results to type=“response”

Enhancement

  • check in report.quanti and report.quali if the variables are factors or numeric and return a message if they are not (eventually transform character variables into factors)

ClinReport 0.9.1.11 2019-03-12

Enhancement

  • Add the add.stat function to add a specific statistic in report.quanti function
  • Improve the regroup function to regroup two quantitative desc object
  • Improve the report.quanti function so it’s now possible to not systematically have the default statistics. The user can now implement it’s own statistics using argument func.stat and func.stat.name.
  • Complete the vignettes

ClinReport 0.9.1.12 2019-04-02

Issues

  • correction of add.stat: when subjid=NULL add.stat didn’t work
  • correction in report.quanti: if default quantitative stat were integer, the correct number of digits was not homogeneous
  • correction in report.quanti: total column was not rounded properly, it was always 2 digits
  • correction: spacetable function, reordered lexically the at.row factor: corrected

Enhancement

  • Can regroup more than 2 desc object with the function regroup
  • the vertical lines are splitted in report.doc if the at.row argument is filled it adds more readability to the output
  • the horizontal line under the colspan value underline only the levels of colspan levels it adds more readibility to the doc

ClinReport 0.9.1.13 Unreleased

Enhancement

  • The reporting of LS-Means has been much simplified so now most of the old arguments are deprecated
  • The reporting of Cox model hazard ratios has been added to the report.lsmeans function
  • The print of the tables has been improved
  • Minor bugs have been corrected

ClinReport 0.9.1.14 Unreleased

Enhancement

  • Add drop.y, drop.x1 and drop.x2 arguments in report.quanti and report.quali to drop levels from the results if needed
  • Add the transpose argument in report.lsmeans function to show the statistics in columns or in rows
  • Add the report.modelinfo function, to export in a table the information relative to a statistical model (the call to the model, the package name, the function name, the AIC, BIC, number of observation etc…)
  • If x2 argument is not missing then at.row argument automatically will space the results by row, no need to fill this argument systematically anymore
  • The title is automatically filled with y.label argument
  • Add the remove.missing argument in report.quali to be able to compute the percentage on non missing values only if needed
  • Add transpose function
  • Add hierarchical descriptive statistics for reporting Adverse Event, Medical History and concomitant treatment
  • Add report.sessionInfo to export to Word or R markdown do, the sessionInfo of R

Issues

  • Correction of a bug in report.quanti when x1 and x2 arguments were NULL